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Dr. Thomas Büchler

Puplications

See also

  • Thomas Büchler. Pangenome Structures: Design, Construction, and Applications. Dissertation 2025,
  • Jannik Olbrich; Thomas Büchler; Enno Ohlebusch. Generating Multiple Alignments on a Pangenomic Scale. Journal: Bioinformatics 2025,
  • Jannik Olbrich; Thomas Büchler; Enno Ohlebusch. Generating Multiple Alignments of Genomes of the Same Species. Conference: BIOINFORMATICS 2025,  https://doi.org/10.5220/0013165400003911
  • Enno Ohlebusch; Thomas Büchler; Jannik Olbrich. Faster computation of Chinese frequent strings and their net frequencies. Conference: SPIRE 2024,
  • Thomas Büchler; Jannik Olbrich; Enno Ohlebusch. Efficient short read mapping to a pangenome that is represented by a graph of ED strings. Journal: Bioinformatics 2023,
  • Uwe Baier; Thomas Büchler; Enno Ohlebusch; Pascal Weber. Edge Minimization in de Bruijn Graphs. Information and Computation 2022,
  • Thomas Büchler; Caroline Räther, Pascal Weber; Enno Ohlebusch. Coordinate Systems for Pangenome Graphs based on the Level Function and Minimum Path Covers. Conference: BIOINFORMATICS 2021 :  (Award: Best Student Paper)
  • Uwe Baier; Thomas Büchler; Enno Ohlebusch; Pascal Weber. Edge Minimization in de Bruijn Graphs. Data Compression Conference 2020,
  • Thomas Büchler; Enno Ohlebusch. An improved encoding of genetic variation in a Burrows-Wheeler transform. Journal: Bioinformatics 2019 ,
  • Technical Report: Thomas Büchler. Transforming a bidirected sequence graph into an EDS Graph, to enable the usage of the HPRC reference in the software GED-MAP. (2023)

Teaching

  • Kompletxitätstheorie (Exercises) [SS-24]
  • Algorithmik: Thema Optimierung (Seminar) [SS-24]
  • Grundlagen der Theoretischen Informatik (Exercises) [WS-23/24]
  • Algorithmen (Seminar) [SS-23]
  • Algorithmen und Datenstrukturen (Exercises) [WS-22/23]
  • Algorithmn Engeneering: Thema Pan-Genom-Read-Mapping (Project) [SS-22]
  • Algorithmen und Datenstrukturen (Exercises) [WS-21/22]
  • Berechenbarkeit und Komplexität (Exercises) [SS-21]
  • Logik (Exercises) [SS-21]

Consultation hours

By appointment